Man Linux: Main Page and Category List

NAME

       csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
         based on MIPE version v1.1
         arguments: * tab-delimited file with PCR-level data
                    * tab-delimited file with SNP-level data
                    * tab-delimited file with assay-level data

         Columns in file with PCR-level data:
           pcr_id
           pcr_modified (might be multiple, divided by semi-colon ";")
           pcr_project (might be multiple, divided by semi-colon ";")
           pcr_researcher (might be multiple, divided by semi-colon ";")
           pcr_species
           source_type
           source_id
           design_seq
           primer1_oligo
           primer1_seq
           primer1_tm
           primer2_oligo
           primer2_seq
           primer2_tm
           design_remark (might be multiple, divided by semi-colon ";")
           use_seq
           use_revcomp
           use_remark (might be multiple, divided by semi-colon ";")
           pcr_remark (might be multiple, divided by semi-colon ";")

         Columns in file with SNP-level data:
           pcr_id
           snp_id
           snp_pos
           snp_amb
           snp_remark (might be multiple, divided by semi-colon ";")

         Columns in file with assay-level data:
           pcr_id
           snp_id
           assay_id
           assay_type
           assay_enzyme
           assay_oligo
           assay_specific
           assay_tail
           assay_strand
           assay_remark (might be multiple, divided by semi-colon ";")

SYNOPSIS

       csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>

ADDITIONAL INFO

       See http://mipe.sourceforge.net

AUTHOR

       Jan Aerts (jan.aerts@bbsrc.ac.uk)