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NAME

       fastautils - FASTA format file manipulation utilities

SYNOPSIS

       fastachecksum [ options ] <input file>

       fastaclean

       fastaclip

       fastacomposition

       fastadiff

       fastaexplode

       fastafetch

       fastahardmask

       fastaindex

       fastalength

       fastanrdb

       fastaoverlap

       fastareformat

       fastaremove

       fastarevcomp

       fastasoftmask

       fastasort

       fastasplit

       fastasubseq

       fastatranslate

       fastavalidcds

DESCRIPTION

       These  are  utilities  for  the  manipulation  of FASTA format sequence
       databases which are distributed with the exonerate  sequence  alignment
       program.

ENVIRONMENT

       Not documented yet.

EXAMPLES

       fastalength sequence.fasta
              blah blah

VERSION

       This  documentation accompanies version 2.2.0 of the exonerate package.

AUTHOR

       Guy St.C. Slater.  <guy@ebi.ac.uk>.  See the AUTHORS file  accompanying
       the source code for a list of contributors.

AVAILABILITY

       This source code for the exonerate package is available under the terms
       of the GNU general public licence.

       Please see the file COPYING which was distrubuted with this package, or
       http://www.gnu.org/licenses/gpl.txt for details.

       This package has been developed as part of the ensembl project.  Please
       see http://www.ensembl.org/ for more information.

SEE ALSO

       exonerate(1),e-PCR