NAME
insdseqget - format sequences from GenBank as an XML INSDSet
SYNOPSIS
insdseqget [-] [-d filename] [-i filename] [-m n/p/b] [-n]
[-o filename] [-v]
DESCRIPTION
insdseqget retrieves biological sequence data from GenBank (according
to an input list of GI accession numbers) and prints it out as an XML
INSDSet document.
OPTIONS
A summary of options is included below.
- Print usage message
-d filename
Input file name for date list (desired accessions, one per line,
followed by a blank line and a list of allowed dates, also one
per line)
-i filename
Input file name for GI list (default = stdin)
-m n/p/b
Molecule type:
n Nucleotide (default)
p Protein
b Both
-n Return only new records (for which the given GI refers to an old
version)
-o filename
Output file name for the XML INSDSet (default = stdout)
-v Fetch SNP Variations
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO
asn2gb(1), gbseqget(1).